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http://conacyt.repositorioinstitucional.mx/jspui/handle/1000/7486| Tutorial: Investigating SARS-CoV-2 evolution and phylogeny using MNHN-Tree-Tools | |
| Thomas Haschka | |
| Acceso Abierto | |
| Atribución-SinDerivadas | |
| https://doi.org/10.1101/2021.12.21.473702 | |
| https://www.biorxiv.org/content/10.1101/2021.12.21.473702v1 | |
| The Covid-19 pandemic has caused at more than 3 million deaths by Mai this year [1]. It had a significant impact on the daily life and the global economy [2]. The virus has since its first recorded outbreak in China [3] mutated into new strains [4]. The Nextstrain [5] project has so far been monitoring the evolution of the virus. At the same time we were developing in our lab the MNHN-Tree-Tools [6] toolkit, primarily for the investigation of DNA repeat sequences. We have further extended MNHN-Tree-Tools [6] to guide phylogenetics. As such the toolkit has evolved into a high performance code, allowing for a fast investigation of millions of sequences. Given the context of the pandemic it became evident that we will use our versatile tool to investigate the evolution of SARS-CoV-2 sequences. Our efforts have cumulated in this tutorial that we share with the scientific community. | |
| medRxiv and bioRxiv | |
| 21-12-2021 | |
| Preimpreso | |
| www.biorxiv.org | |
| Inglés | |
| Epidemia COVID-19 | |
| Público en general | |
| VIRUS RESPIRATORIOS | |
| Versión publicada | |
| publishedVersion - Versión publicada | |
| Aparece en las colecciones: | Artículos científicos |
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| Fichero | Tamaño | Formato | |
|---|---|---|---|
| Tutorial_Investigating SARS COV2 evolution and phylogeny using MNHN Tree Tools.pdf | 4.42 MB | Adobe PDF | Visualizar/Abrir |