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Human SARS-CoV-2 has evolved to reduce CG dinucleotide in its open reading frames
Wang Yong.
Mao Jun-Ming.
Wang Guang-Dong.
Qiu Ze.
Yao Qin.
Chen Ke-Ping.
Acceso Abierto
Atribución-NoComercial-SinDerivadas
10.21203/rs.3.rs-21003/v1
The causative agent of COVID-19 is a severe acute respiratory syndrome-related coronavirus which has been officially named SARS-CoV-2. Here we report the discovery of extremely low CG abundance in its open reading frames. We found that CG reduction in SARS-CoV-2 is achieved mainly through mutating C/G into A/T, and CG is the best target for mutation. In view of energy usage, a coronavirus with low CG abundance has higher efficiency in translating its RNA, because the secondary structure formed by viral genome is less stable. 5’-untranslated region of SARS-CoV-2 has much more CGs and is capable of recruiting host ribosomes to initiate translation. Notably, genomes of cellular organisms also have very low CG abundance, suggesting that mutating C/G into A/T occurs universally in all life forms. Moreover, CG is related to mutational hotspots and CpG islands in cellular organisms. The relationship between them is worthy of further investigations.
assets.researchsquare.com
2020
Artículo
https://assets.researchsquare.com/files/rs-21003/v1/manuscript.pdf
Inglés
VIRUS RESPIRATORIOS
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