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HLA predictions from the bronchoalveolar lavage fluid samples of five patients at the early stage of the Wuhan seafood market COVID-19 outbreak
Rene L Warren.
Inanc Birol.
Acceso Abierto
Atribución-NoComercial-SinDerivadas
https://arxiv.org/pdf/2004.07108v1.pdf
We are in the midst of a global viral pandemic, one with no cure and a high mortality rate. The Human Leukocyte Antigen (HLA) gene complex plays a critical role in host immunity. We predicted HLA class I alleles from the transcriptome sequencing data prepared from the bronchoalveolar lavage fluid samples of five patients at the early stage of the COVID-19 outbreak. We identified the HLA-I allele A*24:02 in four out of five patients, which is higher than the expected frequency (17.2%) in the South Han Chinese population. The difference is statistically significant with a p-value less than $10^{-4}$. Our analysis results may help provide future insights on disease susceptibility.
arxiv.org
2020
Artículo
https://arxiv.org/pdf/2004.07108v1.pdf
Inglés
VIRUS RESPIRATORIOS
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